Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rpap1Q80TE0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rpap1Q80TE0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
Rpap1Q80TE0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Rpap1Q80TE0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC25.5■■□□□ 1.67
Rpap1Q80TE0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Rpap1Q80TE0 Gm6858-201ENSMUST00000208582 1468 ntBASIC25.5■■□□□ 1.67
Rpap1Q80TE0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rpap1Q80TE0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rpap1Q80TE0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rpap1Q80TE0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rpap1Q80TE0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Rpap1Q80TE0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC25.49■■□□□ 1.67
Rpap1Q80TE0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC25.49■■□□□ 1.67
Rpap1Q80TE0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC25.49■■□□□ 1.67
Rpap1Q80TE0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rpap1Q80TE0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rpap1Q80TE0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rpap1Q80TE0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rpap1Q80TE0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Chchd1-203ENSMUST00000224633 557 ntBASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rpap1Q80TE0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rpap1Q80TE0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 Gm5682-201ENSMUST00000173402 505 ntBASIC25.46■■□□□ 1.67
Rpap1Q80TE0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 Gm11764-201ENSMUST00000120221 623 ntBASIC25.46■■□□□ 1.67
Rpap1Q80TE0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC25.46■■□□□ 1.67
Rpap1Q80TE0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Rpap1Q80TE0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
Rpap1Q80TE0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Gm27646-201ENSMUST00000183989 110 ntBASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Rpap1Q80TE0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rpap1Q80TE0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC25.43■■□□□ 1.66
Rpap1Q80TE0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rpap1Q80TE0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Rpap1Q80TE0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC25.43■■□□□ 1.66
Rpap1Q80TE0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Rpap1Q80TE0 Gm4913-201ENSMUST00000117075 1290 ntBASIC25.43■■□□□ 1.66
Rpap1Q80TE0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rpap1Q80TE0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC25.43■■□□□ 1.66
Rpap1Q80TE0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rpap1Q80TE0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rpap1Q80TE0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Rpap1Q80TE0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rpap1Q80TE0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms