Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38bQ80SY5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Prpf38bQ80SY5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Gm15794-201ENSMUST00000120182 631 ntBASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Gm15372-201ENSMUST00000120729 834 ntBASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf38bQ80SY5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Gm5186-201ENSMUST00000218781 920 ntBASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Prpf38bQ80SY5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Gm37025-201ENSMUST00000195159 829 ntBASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38bQ80SY5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Mir8112-201ENSMUST00000184382 131 ntBASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms