Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Pif1Q80SX8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.19■□□□□ 0.02
Pif1Q80SX8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pif1Q80SX8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pif1Q80SX8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pif1Q80SX8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pif1Q80SX8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pif1Q80SX8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pif1Q80SX8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pif1Q80SX8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.18■□□□□ 0.02
Pif1Q80SX8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.18■□□□□ 0.02
Pif1Q80SX8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pif1Q80SX8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.17■□□□□ 0.02
Pif1Q80SX8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Rprl3-201ENSMUST00000157400 290 ntBASIC15.17■□□□□ 0.02
Pif1Q80SX8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.17■□□□□ 0.02
Pif1Q80SX8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 AW822252-206ENSMUST00000208904 237 ntBASIC15.17■□□□□ 0.02
Pif1Q80SX8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.17■□□□□ 0.02
Pif1Q80SX8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pif1Q80SX8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Gm5867-201ENSMUST00000063197 592 ntBASIC15.16■□□□□ 0.02
Pif1Q80SX8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pif1Q80SX8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pif1Q80SX8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms