Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Gm27000-201ENSMUST00000182943 842 ntBASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Otub1Q7TQI3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Gm5417-201ENSMUST00000079706 384 ntBASIC15.71■□□□□ 0.11
Otub1Q7TQI3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Otub1Q7TQI3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Otub1Q7TQI3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Otub1Q7TQI3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.71■□□□□ 0.1
Otub1Q7TQI3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Otub1Q7TQI3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Otub1Q7TQI3 Haglr-201ENSMUST00000100000 2085 ntBASIC15.71■□□□□ 0.1
Otub1Q7TQI3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Otub1Q7TQI3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Gm18958-201ENSMUST00000174258 762 ntBASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.7■□□□□ 0.1
Otub1Q7TQI3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Otub1Q7TQI3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Otub1Q7TQI3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms