Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn10aQ6QIY3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn10aQ6QIY3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn10aQ6QIY3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Scn10aQ6QIY3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn10aQ6QIY3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn10aQ6QIY3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Gm8344-201ENSMUST00000119813 856 ntBASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Gm4899-201ENSMUST00000178708 719 ntBASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Gm8396-201ENSMUST00000057361 823 ntBASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Scn10aQ6QIY3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn10aQ6QIY3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn10aQ6QIY3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Scn10aQ6QIY3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn10aQ6QIY3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Scn10aQ6QIY3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scn10aQ6QIY3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn10aQ6QIY3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn10aQ6QIY3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn10aQ6QIY3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn10aQ6QIY3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn10aQ6QIY3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn10aQ6QIY3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.58■□□□□ 0.56
Scn10aQ6QIY3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn10aQ6QIY3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.58■□□□□ 0.56
Scn10aQ6QIY3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn10aQ6QIY3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Gm45167-201ENSMUST00000208007 322 ntBASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Scn10aQ6QIY3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Gm8825-201ENSMUST00000182565 998 ntBASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn10aQ6QIY3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms