Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd4Q6PDQ2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd4Q6PDQ2 Gm9727-201ENSMUST00000161387 555 ntBASIC21.46■■□□□ 1.03
Chd4Q6PDQ2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC21.46■■□□□ 1.03
Chd4Q6PDQ2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd4Q6PDQ2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd4Q6PDQ2 Gm27702-201ENSMUST00000184512 56 ntBASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chd4Q6PDQ2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC21.44■■□□□ 1.02
Chd4Q6PDQ2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Gm2308-201ENSMUST00000166539 1004 ntBASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Gm8000-201ENSMUST00000188378 592 ntBASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Gm15467-201ENSMUST00000120582 445 ntBASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chd4Q6PDQ2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 Gm11764-201ENSMUST00000120221 623 ntBASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd4Q6PDQ2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Gm43332-201ENSMUST00000202511 1044 ntBASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.41■■□□□ 1.02
Chd4Q6PDQ2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chd4Q6PDQ2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms