Protein–RNA interactions for Protein: Q6NZK8

Ptpdc1, Protein tyrosine phosphatase domain-containing protein 1, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpdc1Q6NZK8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptpdc1Q6NZK8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptpdc1Q6NZK8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptpdc1Q6NZK8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptpdc1Q6NZK8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptpdc1Q6NZK8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ptpdc1Q6NZK8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Gm10013-201ENSMUST00000106074 672 ntBASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ptpdc1Q6NZK8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Gm11355-201ENSMUST00000121120 306 ntBASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ptpdc1Q6NZK8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ptpdc1Q6NZK8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ptpdc1Q6NZK8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ptpdc1Q6NZK8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptpdc1Q6NZK8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptpdc1Q6NZK8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptpdc1Q6NZK8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Ptpdc1Q6NZK8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ptpdc1Q6NZK8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.02■□□□□ 0.8
Ptpdc1Q6NZK8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms