Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sp140Q6NSQ5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Gm44450-201ENSMUST00000199528 114 ntBASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sp140Q6NSQ5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Gm13474-201ENSMUST00000122466 815 ntBASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Gm18115-201ENSMUST00000221209 621 ntBASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.72■□□□□ 0.27
Sp140Q6NSQ5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sp140Q6NSQ5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.71■□□□□ 0.27
Sp140Q6NSQ5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sp140Q6NSQ5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sp140Q6NSQ5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sp140Q6NSQ5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sp140Q6NSQ5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sp140Q6NSQ5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sp140Q6NSQ5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.71■□□□□ 0.27
Sp140Q6NSQ5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.71■□□□□ 0.27
Sp140Q6NSQ5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms