Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt40Q6IFX3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Krt40Q6IFX3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Gm13884-201ENSMUST00000118103 829 ntBASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.35■□□□□ 0.69
Krt40Q6IFX3 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt40Q6IFX3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt40Q6IFX3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Krt40Q6IFX3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.33■□□□□ 0.69
Krt40Q6IFX3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.33■□□□□ 0.69
Krt40Q6IFX3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt40Q6IFX3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt40Q6IFX3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt40Q6IFX3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt40Q6IFX3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.33■□□□□ 0.68
Krt40Q6IFX3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Krt40Q6IFX3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt40Q6IFX3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt40Q6IFX3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Krt40Q6IFX3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt40Q6IFX3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Krt40Q6IFX3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt40Q6IFX3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt40Q6IFX3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt40Q6IFX3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Mzt1-203ENSMUST00000227948 952 ntBASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt40Q6IFX3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Krt40Q6IFX3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Krt40Q6IFX3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Krt40Q6IFX3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Krt40Q6IFX3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Krt40Q6IFX3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Krt40Q6IFX3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms