Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.66□□□□□ -0.22
Col7a1Q63870 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col7a1Q63870 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col7a1Q63870 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col7a1Q63870 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col7a1Q63870 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col7a1Q63870 Gm44719-201ENSMUST00000206404 149 ntBASIC13.66□□□□□ -0.22
Col7a1Q63870 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.66□□□□□ -0.22
Col7a1Q63870 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col7a1Q63870 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col7a1Q63870 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col7a1Q63870 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col7a1Q63870 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col7a1Q63870 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col7a1Q63870 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.65□□□□□ -0.22
Col7a1Q63870 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Col7a1Q63870 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col7a1Q63870 Mir7085-201ENSMUST00000184353 66 ntBASIC13.65□□□□□ -0.22
Col7a1Q63870 Gm9172-201ENSMUST00000212092 954 ntBASIC13.65□□□□□ -0.22
Col7a1Q63870 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col7a1Q63870 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Col7a1Q63870 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col7a1Q63870 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.65□□□□□ -0.22
Col7a1Q63870 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col7a1Q63870 Gm14928-201ENSMUST00000120198 477 ntBASIC13.65□□□□□ -0.22
Col7a1Q63870 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.65□□□□□ -0.22
Col7a1Q63870 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.65□□□□□ -0.22
Col7a1Q63870 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Col7a1Q63870 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.65□□□□□ -0.22
Col7a1Q63870 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col7a1Q63870 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.65□□□□□ -0.22
Col7a1Q63870 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Col7a1Q63870 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col7a1Q63870 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.64□□□□□ -0.23
Col7a1Q63870 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.64□□□□□ -0.23
Col7a1Q63870 Gm27430-201ENSMUST00000184585 107 ntBASIC13.64□□□□□ -0.23
Col7a1Q63870 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.64□□□□□ -0.23
Col7a1Q63870 Gm44333-201ENSMUST00000197168 107 ntBASIC13.64□□□□□ -0.23
Col7a1Q63870 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col7a1Q63870 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.64□□□□□ -0.23
Col7a1Q63870 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col7a1Q63870 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.63□□□□□ -0.23
Col7a1Q63870 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.63□□□□□ -0.23
Col7a1Q63870 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.63□□□□□ -0.23
Col7a1Q63870 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.63□□□□□ -0.23
Col7a1Q63870 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.63□□□□□ -0.23
Col7a1Q63870 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.63□□□□□ -0.23
Col7a1Q63870 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.63□□□□□ -0.23
Col7a1Q63870 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col7a1Q63870 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.62□□□□□ -0.23
Col7a1Q63870 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.62□□□□□ -0.23
Col7a1Q63870 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.62□□□□□ -0.23
Col7a1Q63870 Gm10253-201ENSMUST00000194270 940 ntBASIC13.62□□□□□ -0.23
Col7a1Q63870 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.62□□□□□ -0.23
Col7a1Q63870 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Col7a1Q63870 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.62□□□□□ -0.23
Col7a1Q63870 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col7a1Q63870 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms