Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.18□□□□□ -0.14
Vamp1Q62442 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Vamp1Q62442 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vamp1Q62442 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Vamp1Q62442 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.17□□□□□ -0.14
Vamp1Q62442 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Vamp1Q62442 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vamp1Q62442 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Gm7514-201ENSMUST00000209475 934 ntBASIC14.17□□□□□ -0.14
Vamp1Q62442 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Vamp1Q62442 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vamp1Q62442 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Vamp1Q62442 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vamp1Q62442 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.16□□□□□ -0.14
Vamp1Q62442 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Vamp1Q62442 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.16□□□□□ -0.14
Vamp1Q62442 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.16□□□□□ -0.14
Vamp1Q62442 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vamp1Q62442 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vamp1Q62442 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.15□□□□□ -0.14
Vamp1Q62442 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.15□□□□□ -0.14
Vamp1Q62442 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vamp1Q62442 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.15□□□□□ -0.14
Vamp1Q62442 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.15□□□□□ -0.14
Vamp1Q62442 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vamp1Q62442 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.15□□□□□ -0.14
Vamp1Q62442 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vamp1Q62442 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vamp1Q62442 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vamp1Q62442 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Vamp1Q62442 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms