Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm36967-201ENSMUST00000193814 266 ntBASIC17.6■□□□□ 0.41
Six2Q62232 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.6■□□□□ 0.41
Six2Q62232 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Six2Q62232 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Six2Q62232 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six2Q62232 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.59■□□□□ 0.41
Six2Q62232 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Six2Q62232 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.59■□□□□ 0.41
Six2Q62232 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.59■□□□□ 0.41
Six2Q62232 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Six2Q62232 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Six2Q62232 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six2Q62232 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six2Q62232 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six2Q62232 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six2Q62232 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.58■□□□□ 0.41
Six2Q62232 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Six2Q62232 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six2Q62232 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six2Q62232 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.58■□□□□ 0.41
Six2Q62232 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Six2Q62232 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.58■□□□□ 0.4
Six2Q62232 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Six2Q62232 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Six2Q62232 Gm21559-201ENSMUST00000220638 855 ntBASIC17.58■□□□□ 0.4
Six2Q62232 Gm18032-201ENSMUST00000222541 538 ntBASIC17.58■□□□□ 0.4
Six2Q62232 Gm8587-201ENSMUST00000076538 843 ntBASIC17.58■□□□□ 0.4
Six2Q62232 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six2Q62232 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.58■□□□□ 0.4
Six2Q62232 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six2Q62232 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Six2Q62232 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Six2Q62232 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six2Q62232 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six2Q62232 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Six2Q62232 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.58■□□□□ 0.4
Six2Q62232 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.57■□□□□ 0.4
Six2Q62232 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.57■□□□□ 0.4
Six2Q62232 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Six2Q62232 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.57■□□□□ 0.4
Six2Q62232 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Six2Q62232 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.57■□□□□ 0.4
Six2Q62232 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.57■□□□□ 0.4
Six2Q62232 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Six2Q62232 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.57■□□□□ 0.4
Six2Q62232 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.57■□□□□ 0.4
Six2Q62232 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.56■□□□□ 0.4
Six2Q62232 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.56■□□□□ 0.4
Six2Q62232 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.56■□□□□ 0.4
Six2Q62232 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Gm37722-201ENSMUST00000193757 208 ntBASIC17.56■□□□□ 0.4
Six2Q62232 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Six2Q62232 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Six2Q62232 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Six2Q62232 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms