Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.36■□□□□ 0.69
Scn9aQ62205 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.36■□□□□ 0.69
Scn9aQ62205 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.36■□□□□ 0.69
Scn9aQ62205 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Scn9aQ62205 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Scn9aQ62205 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.35■□□□□ 0.69
Scn9aQ62205 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn9aQ62205 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn9aQ62205 Gm44872-201ENSMUST00000207864 420 ntBASIC19.35■□□□□ 0.69
Scn9aQ62205 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn9aQ62205 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn9aQ62205 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn9aQ62205 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn9aQ62205 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn9aQ62205 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn9aQ62205 Gm27646-201ENSMUST00000183989 110 ntBASIC19.35■□□□□ 0.69
Scn9aQ62205 Gm36967-201ENSMUST00000193814 266 ntBASIC19.35■□□□□ 0.69
Scn9aQ62205 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn9aQ62205 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn9aQ62205 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Scn9aQ62205 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn9aQ62205 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn9aQ62205 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn9aQ62205 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scn9aQ62205 Mir6956-201ENSMUST00000183598 62 ntBASIC19.34■□□□□ 0.69
Scn9aQ62205 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Scn9aQ62205 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.34■□□□□ 0.69
Scn9aQ62205 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn9aQ62205 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn9aQ62205 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn9aQ62205 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn9aQ62205 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn9aQ62205 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.33■□□□□ 0.69
Scn9aQ62205 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.33■□□□□ 0.69
Scn9aQ62205 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.33■□□□□ 0.69
Scn9aQ62205 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Scn9aQ62205 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.33■□□□□ 0.69
Scn9aQ62205 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn9aQ62205 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn9aQ62205 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn9aQ62205 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn9aQ62205 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn9aQ62205 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.33■□□□□ 0.68
Scn9aQ62205 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.33■□□□□ 0.68
Scn9aQ62205 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn9aQ62205 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn9aQ62205 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn9aQ62205 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn9aQ62205 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.32■□□□□ 0.68
Scn9aQ62205 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.32■□□□□ 0.68
Scn9aQ62205 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.32■□□□□ 0.68
Scn9aQ62205 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.32■□□□□ 0.68
Scn9aQ62205 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Scn9aQ62205 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn9aQ62205 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.31■□□□□ 0.68
Scn9aQ62205 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 Gm11025-201ENSMUST00000140773 466 ntBASIC19.31■□□□□ 0.68
Scn9aQ62205 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.31■□□□□ 0.68
Scn9aQ62205 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn9aQ62205 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.31■□□□□ 0.68
Scn9aQ62205 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scn9aQ62205 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scn9aQ62205 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn9aQ62205 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.3■□□□□ 0.68
Scn9aQ62205 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.3■□□□□ 0.68
Scn9aQ62205 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms