Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctr9Q62018 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ctr9Q62018 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctr9Q62018 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctr9Q62018 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctr9Q62018 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.41■□□□□ 0.7
Ctr9Q62018 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ctr9Q62018 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.41■□□□□ 0.7
Ctr9Q62018 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.41■□□□□ 0.7
Ctr9Q62018 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ctr9Q62018 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.41■□□□□ 0.7
Ctr9Q62018 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.41■□□□□ 0.7
Ctr9Q62018 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.41■□□□□ 0.7
Ctr9Q62018 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.41■□□□□ 0.7
Ctr9Q62018 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.41■□□□□ 0.7
Ctr9Q62018 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.41■□□□□ 0.7
Ctr9Q62018 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.41■□□□□ 0.7
Ctr9Q62018 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ctr9Q62018 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctr9Q62018 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctr9Q62018 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctr9Q62018 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctr9Q62018 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctr9Q62018 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.4■□□□□ 0.7
Ctr9Q62018 Gm17971-201ENSMUST00000190239 806 ntBASIC19.4■□□□□ 0.7
Ctr9Q62018 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctr9Q62018 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctr9Q62018 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctr9Q62018 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctr9Q62018 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctr9Q62018 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctr9Q62018 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ctr9Q62018 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Ctr9Q62018 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.39■□□□□ 0.7
Ctr9Q62018 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ctr9Q62018 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctr9Q62018 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctr9Q62018 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctr9Q62018 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.39■□□□□ 0.69
Ctr9Q62018 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ctr9Q62018 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Ctr9Q62018 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.39■□□□□ 0.69
Ctr9Q62018 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctr9Q62018 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctr9Q62018 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctr9Q62018 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctr9Q62018 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctr9Q62018 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctr9Q62018 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
Ctr9Q62018 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctr9Q62018 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ctr9Q62018 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctr9Q62018 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctr9Q62018 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctr9Q62018 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ctr9Q62018 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.38■□□□□ 0.69
Ctr9Q62018 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ctr9Q62018 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ctr9Q62018 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.37■□□□□ 0.69
Ctr9Q62018 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.37■□□□□ 0.69
Ctr9Q62018 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.37■□□□□ 0.69
Ctr9Q62018 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.37■□□□□ 0.69
Ctr9Q62018 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.37■□□□□ 0.69
Ctr9Q62018 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.37■□□□□ 0.69
Ctr9Q62018 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctr9Q62018 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.37■□□□□ 0.69
Ctr9Q62018 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ctr9Q62018 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms