Protein–RNA interactions for Protein: Q61488

Dhh, Desert hedgehog protein, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhhQ61488 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DhhQ61488 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
DhhQ61488 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DhhQ61488 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
DhhQ61488 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DhhQ61488 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DhhQ61488 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
DhhQ61488 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DhhQ61488 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DhhQ61488 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DhhQ61488 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DhhQ61488 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
DhhQ61488 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
DhhQ61488 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
DhhQ61488 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
DhhQ61488 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
DhhQ61488 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
DhhQ61488 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.48□□□□□ -0.09
DhhQ61488 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.48□□□□□ -0.09
DhhQ61488 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
DhhQ61488 Gm33142-201ENSMUST00000193913 867 ntBASIC14.48□□□□□ -0.09
DhhQ61488 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.48□□□□□ -0.09
DhhQ61488 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
DhhQ61488 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Haglr-201ENSMUST00000100000 2085 ntBASIC14.48□□□□□ -0.09
DhhQ61488 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.48□□□□□ -0.09
DhhQ61488 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DhhQ61488 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
DhhQ61488 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.47□□□□□ -0.09
DhhQ61488 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.47□□□□□ -0.09
DhhQ61488 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.47□□□□□ -0.09
DhhQ61488 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
DhhQ61488 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.47□□□□□ -0.09
DhhQ61488 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.47□□□□□ -0.09
DhhQ61488 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
DhhQ61488 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
DhhQ61488 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.47□□□□□ -0.09
DhhQ61488 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.46□□□□□ -0.09
DhhQ61488 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
DhhQ61488 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
DhhQ61488 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
DhhQ61488 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
DhhQ61488 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.46□□□□□ -0.09
DhhQ61488 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
DhhQ61488 Gm18421-201ENSMUST00000204122 625 ntBASIC14.46□□□□□ -0.09
DhhQ61488 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms