Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Six4Q61321 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Six4Q61321 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.66■□□□□ 0.26
Six4Q61321 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Six4Q61321 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.66■□□□□ 0.26
Six4Q61321 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Six4Q61321 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.65■□□□□ 0.26
Six4Q61321 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.65■□□□□ 0.26
Six4Q61321 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.65■□□□□ 0.26
Six4Q61321 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Six4Q61321 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Six4Q61321 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Six4Q61321 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Six4Q61321 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.64■□□□□ 0.25
Six4Q61321 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.64■□□□□ 0.25
Six4Q61321 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Six4Q61321 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.64■□□□□ 0.25
Six4Q61321 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Six4Q61321 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Six4Q61321 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Six4Q61321 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Six4Q61321 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.63■□□□□ 0.25
Six4Q61321 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Six4Q61321 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Six4Q61321 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.63■□□□□ 0.25
Six4Q61321 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.63■□□□□ 0.25
Six4Q61321 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Six4Q61321 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.62■□□□□ 0.25
Six4Q61321 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Six4Q61321 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.62■□□□□ 0.25
Six4Q61321 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.62■□□□□ 0.25
Six4Q61321 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Six4Q61321 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms