Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.17□□□□□ -0.14
Clns1aQ61189 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clns1aQ61189 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.17□□□□□ -0.14
Clns1aQ61189 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.17□□□□□ -0.14
Clns1aQ61189 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.17□□□□□ -0.14
Clns1aQ61189 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clns1aQ61189 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clns1aQ61189 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.16□□□□□ -0.14
Clns1aQ61189 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.16□□□□□ -0.14
Clns1aQ61189 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clns1aQ61189 Gm7290-201ENSMUST00000104990 617 ntBASIC14.16□□□□□ -0.14
Clns1aQ61189 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clns1aQ61189 Gm12918-201ENSMUST00000120234 636 ntBASIC14.16□□□□□ -0.14
Clns1aQ61189 Gm15710-201ENSMUST00000121821 636 ntBASIC14.16□□□□□ -0.14
Clns1aQ61189 Gm6211-202ENSMUST00000167849 925 ntBASIC14.16□□□□□ -0.14
Clns1aQ61189 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Clns1aQ61189 Gm5075-201ENSMUST00000196916 622 ntBASIC14.16□□□□□ -0.14
Clns1aQ61189 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Clns1aQ61189 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.16□□□□□ -0.14
Clns1aQ61189 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.16□□□□□ -0.14
Clns1aQ61189 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clns1aQ61189 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.16□□□□□ -0.14
Clns1aQ61189 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clns1aQ61189 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clns1aQ61189 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clns1aQ61189 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.15□□□□□ -0.14
Clns1aQ61189 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.15□□□□□ -0.14
Clns1aQ61189 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clns1aQ61189 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clns1aQ61189 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clns1aQ61189 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Clns1aQ61189 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.14□□□□□ -0.15
Clns1aQ61189 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.14□□□□□ -0.15
Clns1aQ61189 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.14□□□□□ -0.15
Clns1aQ61189 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.14□□□□□ -0.15
Clns1aQ61189 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clns1aQ61189 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms