Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cln3Q61124 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.05■□□□□ 0.48
Cln3Q61124 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.05■□□□□ 0.48
Cln3Q61124 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.05■□□□□ 0.48
Cln3Q61124 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
Cln3Q61124 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
Cln3Q61124 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.05■□□□□ 0.48
Cln3Q61124 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Cln3Q61124 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.05■□□□□ 0.48
Cln3Q61124 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.05■□□□□ 0.48
Cln3Q61124 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cln3Q61124 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 Gm12497-201ENSMUST00000138778 237 ntBASIC18.04■□□□□ 0.48
Cln3Q61124 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cln3Q61124 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Cln3Q61124 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cln3Q61124 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cln3Q61124 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.04■□□□□ 0.48
Cln3Q61124 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.03■□□□□ 0.48
Cln3Q61124 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln3Q61124 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cln3Q61124 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.03■□□□□ 0.48
Cln3Q61124 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.03■□□□□ 0.48
Cln3Q61124 Gm15467-201ENSMUST00000120582 445 ntBASIC18.03■□□□□ 0.48
Cln3Q61124 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln3Q61124 Gm6550-201ENSMUST00000187574 993 ntBASIC18.03■□□□□ 0.48
Cln3Q61124 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln3Q61124 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cln3Q61124 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cln3Q61124 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln3Q61124 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln3Q61124 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln3Q61124 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln3Q61124 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln3Q61124 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.03■□□□□ 0.48
Cln3Q61124 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln3Q61124 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cln3Q61124 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cln3Q61124 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cln3Q61124 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cln3Q61124 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cln3Q61124 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.02■□□□□ 0.48
Cln3Q61124 Gm27628-201ENSMUST00000184911 107 ntBASIC18.02■□□□□ 0.48
Cln3Q61124 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cln3Q61124 AV026068-213ENSMUST00000223675 1171 ntBASIC18.02■□□□□ 0.48
Cln3Q61124 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cln3Q61124 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cln3Q61124 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.02■□□□□ 0.47
Cln3Q61124 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Cln3Q61124 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cln3Q61124 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Cln3Q61124 Gm4995-201ENSMUST00000117247 432 ntBASIC18.01■□□□□ 0.47
Cln3Q61124 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.01■□□□□ 0.47
Cln3Q61124 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.01■□□□□ 0.47
Cln3Q61124 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Cln3Q61124 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cln3Q61124 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Cln3Q61124 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cln3Q61124 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cln3Q61124 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cln3Q61124 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cln3Q61124 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Cln3Q61124 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cln3Q61124 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cln3Q61124 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cln3Q61124 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms