Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ptch1Q61115 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ptch1Q61115 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ptch1Q61115 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC23.7■■□□□ 1.38
Ptch1Q61115 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptch1Q61115 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptch1Q61115 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptch1Q61115 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptch1Q61115 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptch1Q61115 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ptch1Q61115 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC23.69■■□□□ 1.38
Ptch1Q61115 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ptch1Q61115 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC23.69■■□□□ 1.38
Ptch1Q61115 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptch1Q61115 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptch1Q61115 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC23.69■■□□□ 1.38
Ptch1Q61115 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ptch1Q61115 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptch1Q61115 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptch1Q61115 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ptch1Q61115 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC23.68■■□□□ 1.38
Ptch1Q61115 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch1Q61115 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch1Q61115 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC23.68■■□□□ 1.38
Ptch1Q61115 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch1Q61115 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC23.68■■□□□ 1.38
Ptch1Q61115 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch1Q61115 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch1Q61115 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Ptch1Q61115 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Ptch1Q61115 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch1Q61115 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
Ptch1Q61115 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch1Q61115 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch1Q61115 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch1Q61115 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ptch1Q61115 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch1Q61115 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC23.67■■□□□ 1.38
Ptch1Q61115 AC107711.5-202ENSMUST00000226429 702 ntBASIC23.67■■□□□ 1.38
Ptch1Q61115 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Ptch1Q61115 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch1Q61115 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch1Q61115 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch1Q61115 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch1Q61115 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ptch1Q61115 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch1Q61115 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC23.67■■□□□ 1.38
Ptch1Q61115 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch1Q61115 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch1Q61115 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC23.67■■□□□ 1.38
Ptch1Q61115 Gm5312-201ENSMUST00000203728 547 ntBASIC23.67■■□□□ 1.38
Ptch1Q61115 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch1Q61115 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptch1Q61115 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch1Q61115 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch1Q61115 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch1Q61115 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch1Q61115 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch1Q61115 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC23.66■■□□□ 1.38
Ptch1Q61115 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch1Q61115 Gm44335-201ENSMUST00000196879 141 ntBASIC23.66■■□□□ 1.38
Ptch1Q61115 Gm44297-201ENSMUST00000198304 141 ntBASIC23.66■■□□□ 1.38
Ptch1Q61115 Gm44346-201ENSMUST00000198851 141 ntBASIC23.66■■□□□ 1.38
Ptch1Q61115 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ptch1Q61115 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch1Q61115 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch1Q61115 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch1Q61115 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptch1Q61115 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ptch1Q61115 Gm13332-201ENSMUST00000120451 1398 ntBASIC23.65■■□□□ 1.38
Ptch1Q61115 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptch1Q61115 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ptch1Q61115 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC23.65■■□□□ 1.38
Ptch1Q61115 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptch1Q61115 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ptch1Q61115 Gm45612-201ENSMUST00000211320 160 ntBASIC23.65■■□□□ 1.38
Ptch1Q61115 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Ptch1Q61115 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC23.65■■□□□ 1.38
Ptch1Q61115 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Ptch1Q61115 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Ptch1Q61115 AC157650.3-201ENSMUST00000225058 1476 ntBASIC23.64■■□□□ 1.38
Ptch1Q61115 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ptch1Q61115 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ptch1Q61115 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ptch1Q61115 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ptch1Q61115 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ptch1Q61115 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ptch1Q61115 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ptch1Q61115 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ptch1Q61115 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ptch1Q61115 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ptch1Q61115 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptch1Q61115 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Ptch1Q61115 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms