Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col12a1Q60847 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col12a1Q60847 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.24■□□□□ 0.19
Col12a1Q60847 Gm27622-201ENSMUST00000183779 60 ntBASIC16.24■□□□□ 0.19
Col12a1Q60847 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.24■□□□□ 0.19
Col12a1Q60847 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col12a1Q60847 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col12a1Q60847 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col12a1Q60847 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col12a1Q60847 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col12a1Q60847 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col12a1Q60847 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.24■□□□□ 0.19
Col12a1Q60847 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.23■□□□□ 0.19
Col12a1Q60847 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col12a1Q60847 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col12a1Q60847 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col12a1Q60847 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col12a1Q60847 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col12a1Q60847 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.23■□□□□ 0.19
Col12a1Q60847 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col12a1Q60847 Gm8655-201ENSMUST00000221159 852 ntBASIC16.23■□□□□ 0.19
Col12a1Q60847 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.23■□□□□ 0.19
Col12a1Q60847 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col12a1Q60847 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.23■□□□□ 0.19
Col12a1Q60847 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col12a1Q60847 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col12a1Q60847 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.23■□□□□ 0.19
Col12a1Q60847 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col12a1Q60847 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col12a1Q60847 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Col12a1Q60847 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col12a1Q60847 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col12a1Q60847 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.22■□□□□ 0.19
Col12a1Q60847 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.22■□□□□ 0.19
Col12a1Q60847 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.22■□□□□ 0.19
Col12a1Q60847 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Col12a1Q60847 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.22■□□□□ 0.19
Col12a1Q60847 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col12a1Q60847 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.22■□□□□ 0.19
Col12a1Q60847 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Col12a1Q60847 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col12a1Q60847 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.22■□□□□ 0.19
Col12a1Q60847 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col12a1Q60847 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.22■□□□□ 0.19
Col12a1Q60847 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Col12a1Q60847 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col12a1Q60847 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Col12a1Q60847 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.21■□□□□ 0.19
Col12a1Q60847 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col12a1Q60847 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col12a1Q60847 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col12a1Q60847 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col12a1Q60847 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Col12a1Q60847 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col12a1Q60847 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col12a1Q60847 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col12a1Q60847 Gm13365-201ENSMUST00000121188 973 ntBASIC16.21■□□□□ 0.19
Col12a1Q60847 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col12a1Q60847 Mir6990-201ENSMUST00000183724 91 ntBASIC16.21■□□□□ 0.19
Col12a1Q60847 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col12a1Q60847 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col12a1Q60847 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Col12a1Q60847 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.2■□□□□ 0.18
Col12a1Q60847 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Col12a1Q60847 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.2■□□□□ 0.18
Col12a1Q60847 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Col12a1Q60847 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col12a1Q60847 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms