Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm6376-201ENSMUST00000209407 580 ntBASIC17.06■□□□□ 0.32
Satb1Q60611 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Satb1Q60611 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Satb1Q60611 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Satb1Q60611 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Satb1Q60611 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.05■□□□□ 0.32
Satb1Q60611 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Satb1Q60611 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Satb1Q60611 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Satb1Q60611 Gm12644-201ENSMUST00000119935 606 ntBASIC17.05■□□□□ 0.32
Satb1Q60611 Gm15372-201ENSMUST00000120729 834 ntBASIC17.05■□□□□ 0.32
Satb1Q60611 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Auts2-212ENSMUST00000178555 309 ntBASIC17.05■□□□□ 0.32
Satb1Q60611 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.05■□□□□ 0.32
Satb1Q60611 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.05■□□□□ 0.32
Satb1Q60611 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Satb1Q60611 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Satb1Q60611 Gm7862-201ENSMUST00000121461 292 ntBASIC17.04■□□□□ 0.32
Satb1Q60611 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Satb1Q60611 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Satb1Q60611 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.04■□□□□ 0.32
Satb1Q60611 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Satb1Q60611 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.04■□□□□ 0.32
Satb1Q60611 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.04■□□□□ 0.32
Satb1Q60611 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Satb1Q60611 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Satb1Q60611 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Idnk-204ENSMUST00000226010 1898 ntBASIC17.03■□□□□ 0.32
Satb1Q60611 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.03■□□□□ 0.32
Satb1Q60611 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.03■□□□□ 0.32
Satb1Q60611 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.03■□□□□ 0.32
Satb1Q60611 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Satb1Q60611 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.03■□□□□ 0.32
Satb1Q60611 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Satb1Q60611 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Satb1Q60611 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Satb1Q60611 Gm15467-201ENSMUST00000120582 445 ntBASIC17.02■□□□□ 0.32
Satb1Q60611 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.02■□□□□ 0.32
Satb1Q60611 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.02■□□□□ 0.32
Satb1Q60611 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Satb1Q60611 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms