Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Mir5130-201ENSMUST00000175160 84 ntBASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Gm7889-201ENSMUST00000185591 958 ntBASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Gm45058-201ENSMUST00000205810 766 ntBASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Gm18959-201ENSMUST00000208954 655 ntBASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Gm44450-201ENSMUST00000199528 114 ntBASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Gm43799-201ENSMUST00000201845 579 ntBASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim38Q5SZ99 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim38Q5SZ99 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trim38Q5SZ99 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim38Q5SZ99 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trim38Q5SZ99 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim38Q5SZ99 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim38Q5SZ99 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms