Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Gm15372-201ENSMUST00000120729 834 ntBASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shroom1Q5SX79 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Shroom1Q5SX79 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shroom1Q5SX79 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Shroom1Q5SX79 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Shroom1Q5SX79 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.52■□□□□ 0.39
Shroom1Q5SX79 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Shroom1Q5SX79 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shroom1Q5SX79 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shroom1Q5SX79 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Gm27459-201ENSMUST00000184860 107 ntBASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shroom1Q5SX79 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Gm18421-201ENSMUST00000204122 625 ntBASIC17.5■□□□□ 0.39
Shroom1Q5SX79 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shroom1Q5SX79 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shroom1Q5SX79 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms