Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps54Q5SPW0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Mir3081-201ENSMUST00000175305 84 ntBASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Vps54Q5SPW0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Gm9103-201ENSMUST00000119371 405 ntBASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps54Q5SPW0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Gm27357-201ENSMUST00000183754 135 ntBASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps54Q5SPW0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps54Q5SPW0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps54Q5SPW0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps54Q5SPW0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Vps54Q5SPW0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Gm10052-201ENSMUST00000168019 960 ntBASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Gm7729-201ENSMUST00000050143 801 ntBASIC19.76■□□□□ 0.75
Vps54Q5SPW0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps54Q5SPW0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Gm28033-201ENSMUST00000184224 96 ntBASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Gm44430-201ENSMUST00000203376 995 ntBASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps54Q5SPW0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vps54Q5SPW0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps54Q5SPW0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps54Q5SPW0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps54Q5SPW0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.74■□□□□ 0.75
Vps54Q5SPW0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps54Q5SPW0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps54Q5SPW0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps54Q5SPW0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps54Q5SPW0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps54Q5SPW0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps54Q5SPW0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps54Q5SPW0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms