Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.17□□□□□ -0.3
Trav2Q5R1I9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.17□□□□□ -0.3
Trav2Q5R1I9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav2Q5R1I9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav2Q5R1I9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav2Q5R1I9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms