Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm2559-201ENSMUST00000201323 363 ntBASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm13148-201ENSMUST00000118892 745 ntBASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm17661-201ENSMUST00000170317 270 ntBASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms