Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Gm45906-201ENSMUST00000208911 1430 ntBASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Gm17150-201ENSMUST00000165577 381 ntBASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Gm37153-201ENSMUST00000193637 231 ntBASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Syt7-204ENSMUST00000223586 1344 ntBASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Gm24158-201ENSMUST00000175263 71 ntBASIC9.78□□□□□ -0.84
Herc2Q4U2R1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Gm6266-201ENSMUST00000203844 806 ntBASIC9.78□□□□□ -0.84
Herc2Q4U2R1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Herc2Q4U2R1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.77□□□□□ -0.84
Herc2Q4U2R1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Herc2Q4U2R1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Herc2Q4U2R1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Herc2Q4U2R1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Herc2Q4U2R1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Herc2Q4U2R1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Fst-202ENSMUST00000223640 2612 ntBASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Gm15693-201ENSMUST00000120470 637 ntBASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms