Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.3■□□□□ 0.36
Gm29609Q3UU56 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.29■□□□□ 0.36
Gm29609Q3UU56 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.29■□□□□ 0.36
Gm29609Q3UU56 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm29609Q3UU56 Haglr-201ENSMUST00000100000 2085 ntBASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm29609Q3UU56 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm29609Q3UU56 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Gm13216-201ENSMUST00000117145 591 ntBASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Gm7638-201ENSMUST00000121348 967 ntBASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm29609Q3UU56 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm29609Q3UU56 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm29609Q3UU56 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Gm29609Q3UU56 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.27■□□□□ 0.35
Gm29609Q3UU56 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm29609Q3UU56 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Gm10052-201ENSMUST00000168019 960 ntBASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Gm6623-201ENSMUST00000173570 544 ntBASIC17.26■□□□□ 0.35
Gm29609Q3UU56 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Gm8000-201ENSMUST00000188378 592 ntBASIC17.26■□□□□ 0.35
Gm29609Q3UU56 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.26■□□□□ 0.35
Gm29609Q3UU56 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.26■□□□□ 0.35
Gm29609Q3UU56 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Gm7729-201ENSMUST00000050143 801 ntBASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm29609Q3UU56 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm29609Q3UU56 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm29609Q3UU56 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm29609Q3UU56 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm29609Q3UU56 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm29609Q3UU56 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm29609Q3UU56 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm29609Q3UU56 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm29609Q3UU56 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm29609Q3UU56 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms