Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shisa3Q3UPR0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Shisa3Q3UPR0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shisa3Q3UPR0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shisa3Q3UPR0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Mir6349-201ENSMUST00000184059 97 ntBASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Shisa3Q3UPR0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Gm42545-201ENSMUST00000202755 922 ntBASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Gm18025-201ENSMUST00000221733 862 ntBASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Shisa3Q3UPR0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Shisa3Q3UPR0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms