Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Arhgef40Q3UPH7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Arhgef40Q3UPH7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Arhgef40Q3UPH7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC24.2■■□□□ 1.46
Arhgef40Q3UPH7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Arhgef40Q3UPH7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Arhgef40Q3UPH7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC24.19■■□□□ 1.46
Arhgef40Q3UPH7 Gm15743-202ENSMUST00000182690 1901 ntBASIC24.19■■□□□ 1.46
Arhgef40Q3UPH7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Arhgef40Q3UPH7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Arhgef40Q3UPH7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC24.19■■□□□ 1.46
Arhgef40Q3UPH7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC24.19■■□□□ 1.46
Arhgef40Q3UPH7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC24.19■■□□□ 1.46
Arhgef40Q3UPH7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Arhgef40Q3UPH7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Arhgef40Q3UPH7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Arhgef40Q3UPH7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Arhgef40Q3UPH7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Arhgef40Q3UPH7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Arhgef40Q3UPH7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Arhgef40Q3UPH7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Arhgef40Q3UPH7 Gm7222-201ENSMUST00000117512 906 ntBASIC24.17■■□□□ 1.46
Arhgef40Q3UPH7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Arhgef40Q3UPH7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Arhgef40Q3UPH7 Gm8655-201ENSMUST00000221159 852 ntBASIC24.17■■□□□ 1.46
Arhgef40Q3UPH7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Arhgef40Q3UPH7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Arhgef40Q3UPH7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Arhgef40Q3UPH7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Arhgef40Q3UPH7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Arhgef40Q3UPH7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Arhgef40Q3UPH7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC24.16■■□□□ 1.46
Arhgef40Q3UPH7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Arhgef40Q3UPH7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Arhgef40Q3UPH7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Arhgef40Q3UPH7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Arhgef40Q3UPH7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Arhgef40Q3UPH7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Arhgef40Q3UPH7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 AC117588.1-201ENSMUST00000228510 999 ntBASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Gm44832-201ENSMUST00000208849 2303 ntBASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Gm8784-201ENSMUST00000222096 1435 ntBASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Arhgef40Q3UPH7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
Arhgef40Q3UPH7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC24.14■■□□□ 1.46
Arhgef40Q3UPH7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 Gm5186-201ENSMUST00000218781 920 ntBASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Arhgef40Q3UPH7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Arhgef40Q3UPH7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Arhgef40Q3UPH7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Arhgef40Q3UPH7 Gm37811-201ENSMUST00000192416 2601 ntBASIC24.13■■□□□ 1.45
Arhgef40Q3UPH7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Arhgef40Q3UPH7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC24.13■■□□□ 1.45
Arhgef40Q3UPH7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Arhgef40Q3UPH7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Arhgef40Q3UPH7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC24.13■■□□□ 1.45
Arhgef40Q3UPH7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Arhgef40Q3UPH7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms