Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Timm23-208ENSMUST00000226683 750 ntBASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nhej1Q3KNJ2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Mir1199-201ENSMUST00000117015 119 ntBASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nhej1Q3KNJ2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nhej1Q3KNJ2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nhej1Q3KNJ2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nhej1Q3KNJ2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nhej1Q3KNJ2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nhej1Q3KNJ2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nhej1Q3KNJ2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nhej1Q3KNJ2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.58■□□□□ 0.4
Nhej1Q3KNJ2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nhej1Q3KNJ2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nhej1Q3KNJ2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nhej1Q3KNJ2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nhej1Q3KNJ2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nhej1Q3KNJ2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.58■□□□□ 0.4
Nhej1Q3KNJ2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nhej1Q3KNJ2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms