Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ush2AQ2QI47 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ush2AQ2QI47 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC8.79□□□□□ -1
Ush2AQ2QI47 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC8.79□□□□□ -1
Ush2AQ2QI47 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC8.79□□□□□ -1
Ush2AQ2QI47 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC8.79□□□□□ -1
Ush2AQ2QI47 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC8.79□□□□□ -1
Ush2AQ2QI47 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ush2AQ2QI47 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ush2AQ2QI47 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Ush2AQ2QI47 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ush2AQ2QI47 AC147366.1-201ENSMUST00000227671 852 ntBASIC8.79□□□□□ -1
Ush2AQ2QI47 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ush2AQ2QI47 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC8.79□□□□□ -1
Ush2AQ2QI47 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ush2AQ2QI47 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC8.78□□□□□ -1
Ush2AQ2QI47 Gm24158-201ENSMUST00000175263 71 ntBASIC8.78□□□□□ -1
Ush2AQ2QI47 Gm17837-201ENSMUST00000186435 985 ntBASIC8.78□□□□□ -1
Ush2AQ2QI47 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ush2AQ2QI47 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 AC154231.1-201ENSMUST00000220564 2175 ntBASIC8.78□□□□□ -1
Ush2AQ2QI47 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC8.78□□□□□ -1
Ush2AQ2QI47 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC8.78□□□□□ -1
Ush2AQ2QI47 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ush2AQ2QI47 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ush2AQ2QI47 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ush2AQ2QI47 Gm15743-202ENSMUST00000182690 1901 ntBASIC8.78□□□□□ -1
Ush2AQ2QI47 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC8.78□□□□□ -1
Ush2AQ2QI47 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ush2AQ2QI47 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC8.78□□□□□ -1
Ush2AQ2QI47 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Gm28631-201ENSMUST00000190740 334 ntBASIC8.78□□□□□ -1
Ush2AQ2QI47 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC8.78□□□□□ -1
Ush2AQ2QI47 AC124603.1-201ENSMUST00000223843 308 ntBASIC8.78□□□□□ -1
Ush2AQ2QI47 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC8.78□□□□□ -1
Ush2AQ2QI47 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ush2AQ2QI47 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ush2AQ2QI47 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ush2AQ2QI47 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Ush2AQ2QI47 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ush2AQ2QI47 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC8.77□□□□□ -1
Ush2AQ2QI47 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC8.77□□□□□ -1
Ush2AQ2QI47 Gm6888-201ENSMUST00000221983 706 ntBASIC8.77□□□□□ -1
Ush2AQ2QI47 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Gm12329-201ENSMUST00000120829 1007 ntBASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Rn7s1-201ENSMUST00000174924 300 ntBASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Rn7s2-201ENSMUST00000175032 300 ntBASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Gm26461-201ENSMUST00000175064 290 ntBASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ush2AQ2QI47 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms