Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col1a2Q01149 Gm18733-201ENSMUST00000173950 856 ntBASIC20.59■□□□□ 0.89
Col1a2Q01149 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Col1a2Q01149 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Col1a2Q01149 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col1a2Q01149 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.59■□□□□ 0.89
Col1a2Q01149 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col1a2Q01149 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col1a2Q01149 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Col1a2Q01149 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col1a2Q01149 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col1a2Q01149 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col1a2Q01149 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.58■□□□□ 0.89
Col1a2Q01149 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col1a2Q01149 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col1a2Q01149 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col1a2Q01149 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col1a2Q01149 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col1a2Q01149 Gm12497-201ENSMUST00000138778 237 ntBASIC20.58■□□□□ 0.88
Col1a2Q01149 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Col1a2Q01149 Mir6404-201ENSMUST00000183699 94 ntBASIC20.58■□□□□ 0.88
Col1a2Q01149 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.58■□□□□ 0.88
Col1a2Q01149 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.58■□□□□ 0.88
Col1a2Q01149 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col1a2Q01149 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Col1a2Q01149 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col1a2Q01149 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col1a2Q01149 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.58■□□□□ 0.88
Col1a2Q01149 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Col1a2Q01149 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Col1a2Q01149 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col1a2Q01149 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col1a2Q01149 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col1a2Q01149 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col1a2Q01149 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col1a2Q01149 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col1a2Q01149 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Col1a2Q01149 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col1a2Q01149 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col1a2Q01149 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.57■□□□□ 0.88
Col1a2Q01149 Gm2651-201ENSMUST00000203560 838 ntBASIC20.57■□□□□ 0.88
Col1a2Q01149 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Col1a2Q01149 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col1a2Q01149 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.57■□□□□ 0.88
Col1a2Q01149 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col1a2Q01149 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col1a2Q01149 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col1a2Q01149 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col1a2Q01149 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Col1a2Q01149 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.56■□□□□ 0.88
Col1a2Q01149 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col1a2Q01149 Gm25990-201ENSMUST00000102440 86 ntBASIC20.56■□□□□ 0.88
Col1a2Q01149 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col1a2Q01149 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col1a2Q01149 Gm4459-201ENSMUST00000118750 468 ntBASIC20.56■□□□□ 0.88
Col1a2Q01149 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col1a2Q01149 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.56■□□□□ 0.88
Col1a2Q01149 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col1a2Q01149 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col1a2Q01149 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col1a2Q01149 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.55■□□□□ 0.88
Col1a2Q01149 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.55■□□□□ 0.88
Col1a2Q01149 Gm4535-201ENSMUST00000182274 558 ntBASIC20.55■□□□□ 0.88
Col1a2Q01149 Gm10060-201ENSMUST00000212002 111 ntBASIC20.55■□□□□ 0.88
Col1a2Q01149 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Gm10355-201ENSMUST00000097146 517 ntBASIC20.55■□□□□ 0.88
Col1a2Q01149 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Col1a2Q01149 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Col1a2Q01149 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col1a2Q01149 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col1a2Q01149 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col1a2Q01149 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col1a2Q01149 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col1a2Q01149 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Col1a2Q01149 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Col1a2Q01149 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col1a2Q01149 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.54■□□□□ 0.88
Col1a2Q01149 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col1a2Q01149 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.54■□□□□ 0.88
Col1a2Q01149 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col1a2Q01149 Gm13216-201ENSMUST00000117145 591 ntBASIC20.54■□□□□ 0.88
Col1a2Q01149 Gm13418-201ENSMUST00000119097 944 ntBASIC20.54■□□□□ 0.88
Col1a2Q01149 Mir5131-201ENSMUST00000175426 93 ntBASIC20.54■□□□□ 0.88
Col1a2Q01149 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col1a2Q01149 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.54■□□□□ 0.88
Col1a2Q01149 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col1a2Q01149 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.53■□□□□ 0.88
Col1a2Q01149 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms