Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
GabpaQ00422 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GabpaQ00422 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GabpaQ00422 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.72■□□□□ 0.59
GabpaQ00422 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.72■□□□□ 0.59
GabpaQ00422 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GabpaQ00422 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.71■□□□□ 0.59
GabpaQ00422 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
GabpaQ00422 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
GabpaQ00422 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
GabpaQ00422 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.71■□□□□ 0.59
GabpaQ00422 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
GabpaQ00422 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.71■□□□□ 0.59
GabpaQ00422 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GabpaQ00422 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GabpaQ00422 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.71■□□□□ 0.58
GabpaQ00422 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GabpaQ00422 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GabpaQ00422 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GabpaQ00422 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GabpaQ00422 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.7■□□□□ 0.58
GabpaQ00422 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GabpaQ00422 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GabpaQ00422 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GabpaQ00422 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GabpaQ00422 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GabpaQ00422 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.7■□□□□ 0.58
GabpaQ00422 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GabpaQ00422 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GabpaQ00422 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GabpaQ00422 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.7■□□□□ 0.58
GabpaQ00422 Rps4l-201ENSMUST00000071745 943 ntBASIC18.7■□□□□ 0.58
GabpaQ00422 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GabpaQ00422 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GabpaQ00422 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GabpaQ00422 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.69■□□□□ 0.58
GabpaQ00422 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.69■□□□□ 0.58
GabpaQ00422 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Gm6296-201ENSMUST00000222599 943 ntBASIC18.69■□□□□ 0.58
GabpaQ00422 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GabpaQ00422 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
GabpaQ00422 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GabpaQ00422 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GabpaQ00422 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GabpaQ00422 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GabpaQ00422 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GabpaQ00422 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GabpaQ00422 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GabpaQ00422 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GabpaQ00422 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.68■□□□□ 0.58
GabpaQ00422 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
GabpaQ00422 Gm44357-201ENSMUST00000195897 142 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm19658-201ENSMUST00000196231 138 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm44367-201ENSMUST00000196836 138 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm44350-201ENSMUST00000197197 138 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm44390-201ENSMUST00000197533 144 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm44313-201ENSMUST00000198018 138 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm44486-201ENSMUST00000198508 138 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm44314-201ENSMUST00000199263 138 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm44394-201ENSMUST00000199558 138 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm44484-201ENSMUST00000199873 138 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm44466-201ENSMUST00000200264 138 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm44359-201ENSMUST00000200671 138 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.68■□□□□ 0.58
GabpaQ00422 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GabpaQ00422 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GabpaQ00422 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GabpaQ00422 Rarb-207ENSMUST00000225921 2756 ntBASIC18.68■□□□□ 0.58
GabpaQ00422 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GabpaQ00422 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GabpaQ00422 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms