Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx3-2P97503 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx3-2P97503 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx3-2P97503 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx3-2P97503 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx3-2P97503 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx3-2P97503 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx3-2P97503 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx3-2P97503 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx3-2P97503 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx3-2P97503 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx3-2P97503 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx3-2P97503 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx3-2P97503 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx3-2P97503 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.58■□□□□ 0.08
Nkx3-2P97503 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx3-2P97503 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Gm27742-201ENSMUST00000184667 60 ntBASIC15.57■□□□□ 0.08
Nkx3-2P97503 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.57■□□□□ 0.08
Nkx3-2P97503 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.57■□□□□ 0.08
Nkx3-2P97503 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Gm11336-201ENSMUST00000118168 334 ntBASIC15.56■□□□□ 0.08
Nkx3-2P97503 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Gm17807-201ENSMUST00000186869 298 ntBASIC15.56■□□□□ 0.08
Nkx3-2P97503 Gm18669-201ENSMUST00000216049 778 ntBASIC15.56■□□□□ 0.08
Nkx3-2P97503 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx3-2P97503 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.55■□□□□ 0.08
Nkx3-2P97503 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx3-2P97503 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx3-2P97503 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx3-2P97503 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms