Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.19■□□□□ 0.02
Cacna1aP97445 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Gm14140-201ENSMUST00000119999 995 ntBASIC15.19■□□□□ 0.02
Cacna1aP97445 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Cacna1aP97445 Gm6550-201ENSMUST00000187574 993 ntBASIC15.19■□□□□ 0.02
Cacna1aP97445 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.19■□□□□ 0.02
Cacna1aP97445 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.19■□□□□ 0.02
Cacna1aP97445 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cacna1aP97445 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cacna1aP97445 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cacna1aP97445 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.18■□□□□ 0.02
Cacna1aP97445 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cacna1aP97445 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1aP97445 Gm25990-201ENSMUST00000102440 86 ntBASIC15.18■□□□□ 0.02
Cacna1aP97445 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.18■□□□□ 0.02
Cacna1aP97445 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.18■□□□□ 0.02
Cacna1aP97445 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.18■□□□□ 0.02
Cacna1aP97445 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cacna1aP97445 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cacna1aP97445 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cacna1aP97445 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cacna1aP97445 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cacna1aP97445 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Gm9727-201ENSMUST00000161387 555 ntBASIC15.17■□□□□ 0.02
Cacna1aP97445 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cacna1aP97445 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.17■□□□□ 0.02
Cacna1aP97445 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1aP97445 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cacna1aP97445 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.17■□□□□ 0.02
Cacna1aP97445 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1aP97445 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.16■□□□□ 0.02
Cacna1aP97445 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.16■□□□□ 0.02
Cacna1aP97445 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.16■□□□□ 0.02
Cacna1aP97445 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1aP97445 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1aP97445 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.16■□□□□ 0.02
Cacna1aP97445 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Cacna1aP97445 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cacna1aP97445 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms