Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim43cP86449 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim43cP86449 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trim43cP86449 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trim43cP86449 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim43cP86449 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Trim43cP86449 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim43cP86449 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trim43cP86449 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43cP86449 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43cP86449 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim43cP86449 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43cP86449 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43cP86449 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43cP86449 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43cP86449 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim43cP86449 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim43cP86449 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43cP86449 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43cP86449 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.94■□□□□ 0.46
Trim43cP86449 Gm6659-201ENSMUST00000174752 547 ntBASIC17.94■□□□□ 0.46
Trim43cP86449 Gm36967-201ENSMUST00000193814 266 ntBASIC17.94■□□□□ 0.46
Trim43cP86449 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.94■□□□□ 0.46
Trim43cP86449 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43cP86449 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43cP86449 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Trim43cP86449 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43cP86449 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43cP86449 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim43cP86449 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim43cP86449 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43cP86449 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim43cP86449 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43cP86449 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43cP86449 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trim43cP86449 Gm6345-202ENSMUST00000180900 204 ntBASIC17.93■□□□□ 0.46
Trim43cP86449 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim43cP86449 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43cP86449 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim43cP86449 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43cP86449 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43cP86449 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43cP86449 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim43cP86449 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43cP86449 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43cP86449 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43cP86449 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trim43cP86449 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trim43cP86449 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.92■□□□□ 0.46
Trim43cP86449 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.92■□□□□ 0.46
Trim43cP86449 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim43cP86449 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43cP86449 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trim43cP86449 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim43cP86449 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim43cP86449 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim43cP86449 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43cP86449 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms