Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Otx1P80205 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Otx1P80205 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.18□□□□□ -0.14
Otx1P80205 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Otx1P80205 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Otx1P80205 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.18□□□□□ -0.14
Otx1P80205 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Otx1P80205 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Otx1P80205 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Otx1P80205 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.18□□□□□ -0.14
Otx1P80205 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otx1P80205 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Otx1P80205 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.17□□□□□ -0.14
Otx1P80205 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Otx1P80205 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.17□□□□□ -0.14
Otx1P80205 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Otx1P80205 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.17□□□□□ -0.14
Otx1P80205 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.17□□□□□ -0.14
Otx1P80205 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Otx1P80205 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otx1P80205 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Otx1P80205 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Otx1P80205 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.16□□□□□ -0.14
Otx1P80205 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Otx1P80205 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Otx1P80205 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.16□□□□□ -0.14
Otx1P80205 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.16□□□□□ -0.14
Otx1P80205 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Gm7367-201ENSMUST00000057611 492 ntBASIC14.16□□□□□ -0.14
Otx1P80205 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Otx1P80205 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otx1P80205 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otx1P80205 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otx1P80205 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Otx1P80205 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otx1P80205 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otx1P80205 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Otx1P80205 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otx1P80205 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Otx1P80205 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Otx1P80205 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otx1P80205 Gm10013-201ENSMUST00000106074 672 ntBASIC14.15□□□□□ -0.14
Otx1P80205 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Otx1P80205 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Otx1P80205 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms