Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vamp3P63024 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vamp3P63024 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vamp3P63024 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vamp3P63024 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vamp3P63024 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vamp3P63024 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.74□□□□□ -0.37
Vamp3P63024 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vamp3P63024 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vamp3P63024 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.73□□□□□ -0.37
Vamp3P63024 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.73□□□□□ -0.37
Vamp3P63024 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Gm7332-201ENSMUST00000118351 454 ntBASIC12.73□□□□□ -0.37
Vamp3P63024 Gm27502-201ENSMUST00000183495 199 ntBASIC12.73□□□□□ -0.37
Vamp3P63024 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.73□□□□□ -0.37
Vamp3P63024 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vamp3P63024 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Vamp3P63024 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vamp3P63024 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vamp3P63024 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vamp3P63024 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.72□□□□□ -0.37
Vamp3P63024 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vamp3P63024 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vamp3P63024 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Vamp3P63024 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vamp3P63024 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vamp3P63024 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vamp3P63024 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.71□□□□□ -0.37
Vamp3P63024 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vamp3P63024 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vamp3P63024 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vamp3P63024 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vamp3P63024 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vamp3P63024 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vamp3P63024 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vamp3P63024 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Vamp3P63024 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vamp3P63024 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.7□□□□□ -0.38
Vamp3P63024 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vamp3P63024 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vamp3P63024 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vamp3P63024 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Vamp3P63024 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.7□□□□□ -0.38
Vamp3P63024 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vamp3P63024 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vamp3P63024 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vamp3P63024 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vamp3P63024 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vamp3P63024 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vamp3P63024 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms