Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NcanP55066 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NcanP55066 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
NcanP55066 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
NcanP55066 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.37■□□□□ 0.37
NcanP55066 Gm17271-201ENSMUST00000165535 355 ntBASIC17.37■□□□□ 0.37
NcanP55066 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NcanP55066 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.37■□□□□ 0.37
NcanP55066 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.37■□□□□ 0.37
NcanP55066 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Iqck-206ENSMUST00000208658 2891 ntBASIC17.36■□□□□ 0.37
NcanP55066 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.36■□□□□ 0.37
NcanP55066 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.36■□□□□ 0.37
NcanP55066 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Gm9172-201ENSMUST00000212092 954 ntBASIC17.36■□□□□ 0.37
NcanP55066 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.36■□□□□ 0.37
NcanP55066 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NcanP55066 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.36■□□□□ 0.37
NcanP55066 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
NcanP55066 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.35■□□□□ 0.37
NcanP55066 Gm25406-201ENSMUST00000157599 105 ntBASIC17.35■□□□□ 0.37
NcanP55066 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Gm17968-201ENSMUST00000194902 784 ntBASIC17.35■□□□□ 0.37
NcanP55066 Gm45167-201ENSMUST00000208007 322 ntBASIC17.35■□□□□ 0.37
NcanP55066 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.35■□□□□ 0.37
NcanP55066 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.35■□□□□ 0.37
NcanP55066 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NcanP55066 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.35■□□□□ 0.37
NcanP55066 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.35■□□□□ 0.37
NcanP55066 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.35■□□□□ 0.37
NcanP55066 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.35■□□□□ 0.37
NcanP55066 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NcanP55066 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
NcanP55066 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NcanP55066 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NcanP55066 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NcanP55066 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NcanP55066 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NcanP55066 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.34■□□□□ 0.37
NcanP55066 Gm44492-201ENSMUST00000197012 141 ntBASIC17.34■□□□□ 0.37
NcanP55066 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NcanP55066 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NcanP55066 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NcanP55066 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NcanP55066 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NcanP55066 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NcanP55066 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NcanP55066 Gm13823-201ENSMUST00000119930 345 ntBASIC17.33■□□□□ 0.36
NcanP55066 Gm11764-201ENSMUST00000120221 623 ntBASIC17.33■□□□□ 0.36
NcanP55066 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
NcanP55066 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.33■□□□□ 0.36
NcanP55066 Gm4899-201ENSMUST00000178708 719 ntBASIC17.33■□□□□ 0.36
NcanP55066 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NcanP55066 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NcanP55066 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NcanP55066 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NcanP55066 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NcanP55066 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NcanP55066 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NcanP55066 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NcanP55066 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NcanP55066 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NcanP55066 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NcanP55066 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms