Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sox1P53783 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox1P53783 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.83■□□□□ 0.28
Sox1P53783 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox1P53783 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.83■□□□□ 0.28
Sox1P53783 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sox1P53783 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox1P53783 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox1P53783 Gm27494-201ENSMUST00000184735 189 ntBASIC16.83■□□□□ 0.28
Sox1P53783 Mir6977-201ENSMUST00000184960 64 ntBASIC16.83■□□□□ 0.28
Sox1P53783 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.83■□□□□ 0.28
Sox1P53783 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.83■□□□□ 0.28
Sox1P53783 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.83■□□□□ 0.28
Sox1P53783 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox1P53783 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox1P53783 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
Sox1P53783 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Sox1P53783 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox1P53783 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sox1P53783 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sox1P53783 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox1P53783 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sox1P53783 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox1P53783 BC021767-201ENSMUST00000126387 1716 ntBASIC16.82■□□□□ 0.28
Sox1P53783 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.82■□□□□ 0.28
Sox1P53783 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox1P53783 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.82■□□□□ 0.28
Sox1P53783 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox1P53783 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox1P53783 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sox1P53783 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sox1P53783 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sox1P53783 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox1P53783 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox1P53783 Mir8112-201ENSMUST00000184382 131 ntBASIC16.82■□□□□ 0.28
Sox1P53783 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.82■□□□□ 0.28
Sox1P53783 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.82■□□□□ 0.28
Sox1P53783 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox1P53783 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sox1P53783 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Sox1P53783 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox1P53783 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sox1P53783 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox1P53783 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sox1P53783 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox1P53783 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox1P53783 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sox1P53783 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.81■□□□□ 0.28
Sox1P53783 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox1P53783 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox1P53783 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox1P53783 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox1P53783 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox1P53783 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox1P53783 Gm11764-201ENSMUST00000120221 623 ntBASIC16.81■□□□□ 0.28
Sox1P53783 Mir1895-201ENSMUST00000122615 79 ntBASIC16.81■□□□□ 0.28
Sox1P53783 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox1P53783 Gm25948-201ENSMUST00000175334 112 ntBASIC16.81■□□□□ 0.28
Sox1P53783 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox1P53783 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox1P53783 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.81■□□□□ 0.28
Sox1P53783 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox1P53783 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox1P53783 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox1P53783 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sox1P53783 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Sox1P53783 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Idnk-204ENSMUST00000226010 1898 ntBASIC16.8■□□□□ 0.28
Sox1P53783 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.8■□□□□ 0.28
Sox1P53783 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.8■□□□□ 0.28
Sox1P53783 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox1P53783 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.8■□□□□ 0.28
Sox1P53783 Gm44335-201ENSMUST00000196879 141 ntBASIC16.8■□□□□ 0.28
Sox1P53783 Gm44492-201ENSMUST00000197012 141 ntBASIC16.8■□□□□ 0.28
Sox1P53783 Gm44297-201ENSMUST00000198304 141 ntBASIC16.8■□□□□ 0.28
Sox1P53783 Gm44346-201ENSMUST00000198851 141 ntBASIC16.8■□□□□ 0.28
Sox1P53783 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.8■□□□□ 0.28
Sox1P53783 Gm8655-201ENSMUST00000221159 852 ntBASIC16.8■□□□□ 0.28
Sox1P53783 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.8■□□□□ 0.28
Sox1P53783 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sox1P53783 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Sox1P53783 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox1P53783 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox1P53783 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms