Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.51□□□□□ -0.09
Ccl9P51670 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.51□□□□□ -0.09
Ccl9P51670 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.51□□□□□ -0.09
Ccl9P51670 Timm23-208ENSMUST00000226683 750 ntBASIC14.51□□□□□ -0.09
Ccl9P51670 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccl9P51670 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccl9P51670 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ccl9P51670 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl9P51670 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Ccl9P51670 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.5□□□□□ -0.09
Ccl9P51670 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccl9P51670 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccl9P51670 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccl9P51670 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.5□□□□□ -0.09
Ccl9P51670 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Ccl9P51670 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.5□□□□□ -0.09
Ccl9P51670 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccl9P51670 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.5□□□□□ -0.09
Ccl9P51670 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ccl9P51670 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl9P51670 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Ccl9P51670 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccl9P51670 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccl9P51670 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.49□□□□□ -0.09
Ccl9P51670 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Ccl9P51670 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccl9P51670 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccl9P51670 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccl9P51670 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl9P51670 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl9P51670 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl9P51670 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl9P51670 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl9P51670 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl9P51670 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl9P51670 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccl9P51670 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.48□□□□□ -0.09
Ccl9P51670 Gm3375-201ENSMUST00000203929 796 ntBASIC14.48□□□□□ -0.09
Ccl9P51670 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl9P51670 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl9P51670 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl9P51670 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccl9P51670 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.48□□□□□ -0.09
Ccl9P51670 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl9P51670 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl9P51670 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms