Protein–RNA interactions for Protein: P49919

Cdkn1c, Cyclin-dependent kinase inhibitor 1C, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1cP49919 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.27■□□□□ 0.52
Cdkn1cP49919 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
Cdkn1cP49919 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkn1cP49919 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.27■□□□□ 0.51
Cdkn1cP49919 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdkn1cP49919 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cdkn1cP49919 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdkn1cP49919 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Cdkn1cP49919 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdkn1cP49919 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.26■□□□□ 0.51
Cdkn1cP49919 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdkn1cP49919 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkn1cP49919 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkn1cP49919 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.25■□□□□ 0.51
Cdkn1cP49919 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkn1cP49919 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkn1cP49919 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.25■□□□□ 0.51
Cdkn1cP49919 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkn1cP49919 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkn1cP49919 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkn1cP49919 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkn1cP49919 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkn1cP49919 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkn1cP49919 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdkn1cP49919 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1cP49919 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1cP49919 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1cP49919 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.24■□□□□ 0.51
Cdkn1cP49919 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Cdkn1cP49919 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1cP49919 Nespas-201ENSMUST00000143738 1083 ntBASIC18.24■□□□□ 0.51
Cdkn1cP49919 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1cP49919 Gm6420-201ENSMUST00000193885 723 ntBASIC18.24■□□□□ 0.51
Cdkn1cP49919 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1cP49919 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1cP49919 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1cP49919 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1cP49919 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cdkn1cP49919 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkn1cP49919 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.23■□□□□ 0.51
Cdkn1cP49919 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.23■□□□□ 0.51
Cdkn1cP49919 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.23■□□□□ 0.51
Cdkn1cP49919 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkn1cP49919 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdkn1cP49919 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms