Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.57■□□□□ 0.72
Ercc3P49135 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Gm9013-201ENSMUST00000132939 882 ntBASIC19.57■□□□□ 0.72
Ercc3P49135 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.57■□□□□ 0.72
Ercc3P49135 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.57■□□□□ 0.72
Ercc3P49135 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ercc3P49135 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ercc3P49135 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.56■□□□□ 0.72
Ercc3P49135 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.56■□□□□ 0.72
Ercc3P49135 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Ercc3P49135 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Ercc3P49135 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.56■□□□□ 0.72
Ercc3P49135 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc3P49135 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ercc3P49135 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ercc3P49135 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ercc3P49135 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.55■□□□□ 0.72
Ercc3P49135 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.55■□□□□ 0.72
Ercc3P49135 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ercc3P49135 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc3P49135 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.54■□□□□ 0.72
Ercc3P49135 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.54■□□□□ 0.72
Ercc3P49135 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc3P49135 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc3P49135 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc3P49135 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc3P49135 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc3P49135 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc3P49135 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.54■□□□□ 0.72
Ercc3P49135 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc3P49135 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc3P49135 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ercc3P49135 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc3P49135 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ercc3P49135 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ercc3P49135 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Gm33142-201ENSMUST00000193913 867 ntBASIC19.53■□□□□ 0.72
Ercc3P49135 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.53■□□□□ 0.72
Ercc3P49135 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ercc3P49135 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc3P49135 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ercc3P49135 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.52■□□□□ 0.72
Ercc3P49135 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Ercc3P49135 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 Gm11950-201ENSMUST00000121615 838 ntBASIC19.52■□□□□ 0.72
Ercc3P49135 Gm7284-201ENSMUST00000131667 944 ntBASIC19.52■□□□□ 0.72
Ercc3P49135 Gm25016-201ENSMUST00000158399 131 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms