Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx2P48379 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx2P48379 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx2P48379 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rfx2P48379 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx2P48379 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx2P48379 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rfx2P48379 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rfx2P48379 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.27■□□□□ 0.36
Rfx2P48379 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.27■□□□□ 0.36
Rfx2P48379 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rfx2P48379 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx2P48379 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.27■□□□□ 0.35
Rfx2P48379 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rfx2P48379 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfx2P48379 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfx2P48379 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.26■□□□□ 0.35
Rfx2P48379 Mir3081-201ENSMUST00000175305 84 ntBASIC17.26■□□□□ 0.35
Rfx2P48379 Gm27357-201ENSMUST00000183754 135 ntBASIC17.26■□□□□ 0.35
Rfx2P48379 Gm28033-201ENSMUST00000184224 96 ntBASIC17.26■□□□□ 0.35
Rfx2P48379 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.26■□□□□ 0.35
Rfx2P48379 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx2P48379 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.25■□□□□ 0.35
Rfx2P48379 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Gm17971-201ENSMUST00000190239 806 ntBASIC17.25■□□□□ 0.35
Rfx2P48379 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.25■□□□□ 0.35
Rfx2P48379 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rfx2P48379 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rfx2P48379 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx2P48379 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx2P48379 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx2P48379 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rfx2P48379 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx2P48379 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx2P48379 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx2P48379 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx2P48379 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rfx2P48379 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx2P48379 Gm11336-201ENSMUST00000118168 334 ntBASIC17.24■□□□□ 0.35
Rfx2P48379 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.24■□□□□ 0.35
Rfx2P48379 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfx2P48379 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx2P48379 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx2P48379 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx2P48379 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx2P48379 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx2P48379 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx2P48379 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx2P48379 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx2P48379 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx2P48379 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms