Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.79■□□□□ 0.12
Sox18P43680 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox18P43680 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Gm25990-201ENSMUST00000102440 86 ntBASIC15.78■□□□□ 0.12
Sox18P43680 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Sox18P43680 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.78■□□□□ 0.12
Sox18P43680 Gm9727-201ENSMUST00000161387 555 ntBASIC15.78■□□□□ 0.12
Sox18P43680 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.78■□□□□ 0.12
Sox18P43680 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Sox18P43680 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Sox18P43680 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sox18P43680 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sox18P43680 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox18P43680 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.77■□□□□ 0.12
Sox18P43680 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.77■□□□□ 0.12
Sox18P43680 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Sox18P43680 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.77■□□□□ 0.12
Sox18P43680 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Sox18P43680 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.77■□□□□ 0.12
Sox18P43680 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.77■□□□□ 0.12
Sox18P43680 Gm27000-201ENSMUST00000182943 842 ntBASIC15.77■□□□□ 0.12
Sox18P43680 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.77■□□□□ 0.12
Sox18P43680 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.77■□□□□ 0.12
Sox18P43680 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox18P43680 Gm15590-201ENSMUST00000078419 552 ntBASIC15.77■□□□□ 0.12
Sox18P43680 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox18P43680 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox18P43680 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sox18P43680 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sox18P43680 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sox18P43680 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.76■□□□□ 0.11
Sox18P43680 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Sox18P43680 Gm15173-201ENSMUST00000122049 433 ntBASIC15.76■□□□□ 0.11
Sox18P43680 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sox18P43680 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.76■□□□□ 0.11
Sox18P43680 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sox18P43680 Gm29707-201ENSMUST00000196325 491 ntBASIC15.76■□□□□ 0.11
Sox18P43680 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.76■□□□□ 0.11
Sox18P43680 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.76■□□□□ 0.11
Sox18P43680 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.76■□□□□ 0.11
Sox18P43680 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.76■□□□□ 0.11
Sox18P43680 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.76■□□□□ 0.11
Sox18P43680 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Sox18P43680 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox18P43680 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.76■□□□□ 0.11
Sox18P43680 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.76■□□□□ 0.11
Sox18P43680 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms