Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.27■□□□□ 0.2
HmgclP38060 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
HmgclP38060 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HmgclP38060 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HmgclP38060 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HmgclP38060 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HmgclP38060 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HmgclP38060 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HmgclP38060 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HmgclP38060 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HmgclP38060 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HmgclP38060 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.26■□□□□ 0.19
HmgclP38060 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
HmgclP38060 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HmgclP38060 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.26■□□□□ 0.19
HmgclP38060 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.26■□□□□ 0.19
HmgclP38060 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.26■□□□□ 0.19
HmgclP38060 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HmgclP38060 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HmgclP38060 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.25■□□□□ 0.19
HmgclP38060 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.25■□□□□ 0.19
HmgclP38060 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Gm13836-201ENSMUST00000121159 501 ntBASIC16.25■□□□□ 0.19
HmgclP38060 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.25■□□□□ 0.19
HmgclP38060 Gm9013-201ENSMUST00000132939 882 ntBASIC16.25■□□□□ 0.19
HmgclP38060 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.25■□□□□ 0.19
HmgclP38060 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HmgclP38060 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.25■□□□□ 0.19
HmgclP38060 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HmgclP38060 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HmgclP38060 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.24■□□□□ 0.19
HmgclP38060 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.24■□□□□ 0.19
HmgclP38060 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HmgclP38060 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HmgclP38060 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.24■□□□□ 0.19
HmgclP38060 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HmgclP38060 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HmgclP38060 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HmgclP38060 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HmgclP38060 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HmgclP38060 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.24■□□□□ 0.19
HmgclP38060 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HmgclP38060 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HmgclP38060 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HmgclP38060 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HmgclP38060 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HmgclP38060 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HmgclP38060 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HmgclP38060 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HmgclP38060 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.23■□□□□ 0.19
HmgclP38060 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.23■□□□□ 0.19
HmgclP38060 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HmgclP38060 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HmgclP38060 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms