Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp13P33435 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.92■□□□□ 0.3
Mmp13P33435 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.91■□□□□ 0.3
Mmp13P33435 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.91■□□□□ 0.3
Mmp13P33435 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mmp13P33435 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mmp13P33435 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mmp13P33435 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.91■□□□□ 0.3
Mmp13P33435 Gm11539-201ENSMUST00000119837 557 ntBASIC16.91■□□□□ 0.3
Mmp13P33435 Gm13436-201ENSMUST00000120418 567 ntBASIC16.91■□□□□ 0.3
Mmp13P33435 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.91■□□□□ 0.3
Mmp13P33435 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mmp13P33435 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mmp13P33435 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mmp13P33435 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.91■□□□□ 0.3
Mmp13P33435 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Mmp13P33435 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Mmp13P33435 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp13P33435 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.9■□□□□ 0.3
Mmp13P33435 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Gm9987-201ENSMUST00000069768 567 ntBASIC16.9■□□□□ 0.3
Mmp13P33435 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp13P33435 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Mmp13P33435 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Mmp13P33435 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Mmp13P33435 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Mmp13P33435 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Mmp13P33435 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Mmp13P33435 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Mmp13P33435 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Mmp13P33435 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Gm6433-201ENSMUST00000118634 875 ntBASIC16.89■□□□□ 0.29
Mmp13P33435 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Gm27000-201ENSMUST00000182943 842 ntBASIC16.89■□□□□ 0.29
Mmp13P33435 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.89■□□□□ 0.29
Mmp13P33435 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
Mmp13P33435 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mmp13P33435 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.89■□□□□ 0.29
Mmp13P33435 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Mmp13P33435 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Mmp13P33435 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Mmp13P33435 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Gm13559-201ENSMUST00000120476 863 ntBASIC16.88■□□□□ 0.29
Mmp13P33435 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.88■□□□□ 0.29
Mmp13P33435 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Mmp13P33435 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.88■□□□□ 0.29
Mmp13P33435 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mmp13P33435 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms