Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Rps4l-201ENSMUST00000071745 943 ntBASIC17.63■□□□□ 0.41
Mmp3P28862 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.63■□□□□ 0.41
Mmp3P28862 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Mmp3P28862 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Mmp3P28862 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Mmp3P28862 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mmp3P28862 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.62■□□□□ 0.41
Mmp3P28862 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.62■□□□□ 0.41
Mmp3P28862 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Mmp3P28862 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Mmp3P28862 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.62■□□□□ 0.41
Mmp3P28862 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Mmp3P28862 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Gm44357-201ENSMUST00000195897 142 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Gm19658-201ENSMUST00000196231 138 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Gm44367-201ENSMUST00000196836 138 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Gm44350-201ENSMUST00000197197 138 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Gm44390-201ENSMUST00000197533 144 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Gm44313-201ENSMUST00000198018 138 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Gm44486-201ENSMUST00000198508 138 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Gm44314-201ENSMUST00000199263 138 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Gm44394-201ENSMUST00000199558 138 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Gm44484-201ENSMUST00000199873 138 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Gm44466-201ENSMUST00000200264 138 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Gm44359-201ENSMUST00000200671 138 ntBASIC17.61■□□□□ 0.41
Mmp3P28862 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mmp3P28862 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Mmp3P28862 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Mmp3P28862 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mmp3P28862 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp3P28862 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Mmp3P28862 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp3P28862 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp3P28862 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp3P28862 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp3P28862 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp3P28862 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp3P28862 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Mmp3P28862 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Mmp3P28862 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp3P28862 Gm36967-201ENSMUST00000193814 266 ntBASIC17.6■□□□□ 0.41
Mmp3P28862 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.6■□□□□ 0.41
Mmp3P28862 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.6■□□□□ 0.41
Mmp3P28862 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Mmp3P28862 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp3P28862 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Mmp3P28862 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Mmp3P28862 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Mmp3P28862 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp3P28862 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.6■□□□□ 0.41
Mmp3P28862 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Mmp3P28862 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Mmp3P28862 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.59■□□□□ 0.41
Mmp3P28862 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Mmp3P28862 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms