Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nfkb1P25799 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.93■□□□□ 0.3
Nfkb1P25799 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.93■□□□□ 0.3
Nfkb1P25799 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Nfkb1P25799 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.93■□□□□ 0.3
Nfkb1P25799 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.93■□□□□ 0.3
Nfkb1P25799 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.93■□□□□ 0.3
Nfkb1P25799 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.93■□□□□ 0.3
Nfkb1P25799 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nfkb1P25799 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nfkb1P25799 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.93■□□□□ 0.3
Nfkb1P25799 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.93■□□□□ 0.3
Nfkb1P25799 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nfkb1P25799 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.92■□□□□ 0.3
Nfkb1P25799 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.92■□□□□ 0.3
Nfkb1P25799 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nfkb1P25799 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.92■□□□□ 0.3
Nfkb1P25799 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.92■□□□□ 0.3
Nfkb1P25799 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.92■□□□□ 0.3
Nfkb1P25799 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.92■□□□□ 0.3
Nfkb1P25799 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nfkb1P25799 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nfkb1P25799 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.91■□□□□ 0.3
Nfkb1P25799 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Nfkb1P25799 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nfkb1P25799 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.91■□□□□ 0.3
Nfkb1P25799 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Nfkb1P25799 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Nfkb1P25799 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Nfkb1P25799 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.91■□□□□ 0.3
Nfkb1P25799 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.91■□□□□ 0.3
Nfkb1P25799 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.91■□□□□ 0.3
Nfkb1P25799 Birc2-201ENSMUST00000054878 378 ntBASIC16.91■□□□□ 0.3
Nfkb1P25799 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.91■□□□□ 0.3
Nfkb1P25799 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nfkb1P25799 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nfkb1P25799 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nfkb1P25799 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.9■□□□□ 0.3
Nfkb1P25799 Gm10052-201ENSMUST00000168019 960 ntBASIC16.9■□□□□ 0.3
Nfkb1P25799 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.9■□□□□ 0.3
Nfkb1P25799 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.9■□□□□ 0.3
Nfkb1P25799 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 Gm7729-201ENSMUST00000050143 801 ntBASIC16.9■□□□□ 0.3
Nfkb1P25799 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.9■□□□□ 0.3
Nfkb1P25799 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nfkb1P25799 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Nfkb1P25799 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nfkb1P25799 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nfkb1P25799 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nfkb1P25799 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms